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  5. AMTR_s00010p00256040

AMTR_s00010p00256040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.389

Description : 40S ribosomal protein S9-2 OS=Arabidopsis thaliana


Gene families : OG0001396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001396_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00010p00256040

Target Alias Description ECC score Gene Family Method Actions
Aev_g06508 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g27354 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0276.g061449 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.04G104600.1 Ceric.04G104600 component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.20G045700.1 Ceric.20G045700 component *(uS4) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Cre08.g359750 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g13577 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01011384001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_41315 No alias component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os03g05980.1 LOC_Os03g05980 component RPS9 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os11g38959.1 LOC_Os11g38959 component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Lfl_g28416 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.04 OrthoFinder output from all 47 species
Msp_g37588 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g07949 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c13_19780V3.1 Pp3c13_19780 Ribosomal protein S4 0.04 OrthoFinder output from all 47 species
Pp3c3_23720V3.1 Pp3c3_23720 Ribosomal protein S4 0.04 OrthoFinder output from all 47 species
Pp3c4_15290V3.1 Pp3c4_15290 Ribosomal protein S4 0.01 OrthoFinder output from all 47 species
Sam_g13332 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc04g005680.4.1 Solyc04g005680 component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 40 138
IPR002942 S4_RNA-bd 139 183
No external refs found!