Zm00001d021706 (GRMZM2G041381)


Aliases : GRMZM2G041381

Description : No description available


Gene families : OG_01_0000078 (Gene family) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d021706
Cluster HCCA cluster: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G08880 GAMMA-H2AX,... Histone superfamily protein 0.18 Gene family
AT1G51060 HTA10 histone H2A 10 0.08 Gene family
AT3G20670 HTA13 histone H2A 13 0.06 Gene family
AT4G27230 HTA2 histone H2A 2 0.12 Gene family
AT5G27670 HTA7 histone H2A 7 0.04 Gene family
AT5G54640 RAT5, HTA1, ATHTA1 Histone superfamily protein 0.05 Gene family
AT5G59870 HTA6 histone H2A 6 0.06 Gene family
Cre06.g264950 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.02 Gene family
Cre06.g265350 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.01 Gene family
Cre06.g266700 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre06.g268050 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre06.g268300 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre06.g271350 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre06.g273900 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre06.g274800 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre06.g275850 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.04 Gene family
Cre12.g504750 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre12.g505550 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
Cre12.g506250 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01002735001 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.02 Gene family
GSVIVT01002746001 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01011034001 No alias No description available 0.12 Gene family
GSVIVT01014580001 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.1 Gene family
GSVIVT01025019001 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01025533001 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.08 Gene family
GSVIVT01031123001 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.06 Gene family
LOC_Os01g31800 Os01g0502700 28.1.3.2.1 DNA.synthesis/chromatin... 0.09 Gene family
LOC_Os03g17100 Os03g0279200 28.1.3.2.1 DNA.synthesis/chromatin... 0.05 Gene family
LOC_Os05g02300 Os05g0113900 28.1.3.2.1 DNA.synthesis/chromatin... 0.05 Gene family
LOC_Os05g38640 Os05g0461400 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
LOC_Os07g36140 Os07g0545400 28.1.3.2.1 DNA.synthesis/chromatin... 0.05 Gene family
LOC_Os08g33100 Os08g0427700 28.1.3.2.1 DNA.synthesis/chromatin... 0.12 Gene family
LOC_Os12g25120 Os12g0438000 28.1.3.2.1 DNA.synthesis/chromatin... 0.02 Gene family
LOC_Os12g34510 Os12g0530000 No description available 0.06 Gene family
MA_10426943g0010 No alias No description available 0.06 Gene family
MA_11514g0010 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.07 Gene family
MA_169054g0020 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.11 Gene family
MA_213048g0010 No alias No description available 0.02 Gene family
MA_22203g0020 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family
MA_427046g0010 No alias 28.1.3.2.1 DNA.synthesis/chromatin... 0.07 Gene family
Smo166626 PACid_15417838 No description available 0.03 Gene family
Smo170948 PACid_15409856 No description available 0.04 Gene family
Smo73637 PACid_15408374 No description available 0.03 Gene family
Smo76653 PACid_15417261 28.1.3.2.1 DNA.synthesis/chromatin... 0.02 Gene family
Solyc01g099410.3.1 Solyc01g099410.3 28.1.3.2.1 DNA.synthesis/chromatin... 0.11 Gene family
Solyc09g010400.3.1 Solyc09g010400.3 28.1.3.2.1 DNA.synthesis/chromatin... 0.11 Gene family
Solyc09g074300.1.1 Solyc09g074300.1 No description available 0.2 Gene family
Solyc09g082710.3.1 Solyc09g082710.3 No description available 0.06 Gene family
Solyc10g006560.3.1 Solyc10g006560.3 28.1.3.2.1 DNA.synthesis/chromatin... 0.08 Gene family
Solyc11g073250.2.1 Solyc11g073250.2 28.1.3.2.1 DNA.synthesis/chromatin... 0.24 Gene family
Solyc12g005270.2.1 Solyc12g005270.2 28.1.3.2.1 DNA.synthesis/chromatin... 0.15 Gene family
Zm00001d021707 GRMZM2G042047 28.1.3.2.1 DNA.synthesis/chromatin... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 14 90
IPR032454 Histone_H2A_C 93 126
No external refs found!