AMTR_s00010p00247660 (ATGCN5, GCN5,...)

Aliases : ATGCN5, GCN5, evm_27.TU.AmTr_v1.0_scaffold00010.339

Description : ABC transporter F family member 5 OS=Arabidopsis thaliana

Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00010p00247660
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AT5G64840	ATGCN5, GCN5	general control non-repressible 5	0.04	OrthoFinder output from all 47 species
Aev_g12591	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g04195	ATGCN5, GCN5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g07329	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0168.g054635	ATGCN5, GCN5	not classified & original description: CDS=239-2245	0.05	OrthoFinder output from all 47 species
Ceric.29G008900.1	ATGCN5, GCN5,...	not classified & original description: pacid=50624672...	0.02	OrthoFinder output from all 47 species
Dac_g12683	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01022235001	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
LOC_Os11g39020.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g58557	ATGCN5, GCN5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10437027g0010	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g11090.1	ATGCN5, GCN5	ABC transporter F family member 5 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Nbi_g11528	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g15434	ATGCN5, GCN5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g19383	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g051800.3.1	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Tin_g11682	ATGCN5, GCN5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e011297_P001	ATGCN5, GCN5,...	ABC transporter F family member 5 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0019566	arabinose metabolic process	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0046373	L-arabinose metabolic process	IEP	HCCA
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	482	590
IPR003439	ABC_transporter-like_ATP-bd	155	306

External Links

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AMTR_s00010p00247660 (ATGCN5, GCN5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation