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  5. AMTR_s00010p00237160

AMTR_s00010p00237160 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.289

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00237160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00225110 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00157030 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AT1G61980 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
Aev_g02436 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19152 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10960 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18393 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02967 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24025 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10992 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12390 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14645 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13847 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Gb_31439 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Gb_39322 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33440.1 LOC_Os05g33440 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g09990.1 LOC_Os11g09990 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Lfl_g05600 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_502709g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Mp6g07740.1 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Ore_g35894 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43606 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g082010.3.1 Solyc02g082010 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 179 353
IPR003690 MTERF 100 183
No external refs found!