AMTR_s00010p00228270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.257

No description available


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00228270

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G46460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g004345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11079 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06826.t1 CRR2, Aspi01Gene06826 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25447.t1 Aspi01Gene25447 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37147.t1 Aspi01Gene37147 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016137 No alias not classified & original description: CDS=1-1566 0.04 OrthoFinder output from all 47 species
Azfi_s0042.g026834 No alias not classified & original description: CDS=1-1929 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030882 CRR22 not classified & original description: CDS=1-1611 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033567 EMB2758 not classified & original description: CDS=1-2352 0.03 OrthoFinder output from all 47 species
Azfi_s0139.g051178 No alias not classified & original description: CDS=1-2667 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.02 OrthoFinder output from all 47 species
Azfi_s0471.g072918 No alias not classified & original description: CDS=1-3447 0.03 OrthoFinder output from all 47 species
Cba_g06593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45997 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G044500.1 Ceric.02G044500 not classified & original description: pacid=50585717... 0.03 OrthoFinder output from all 47 species
Ceric.04G047600.1 Ceric.04G047600 not classified & original description: pacid=50632074... 0.04 OrthoFinder output from all 47 species
Ceric.05G036100.1 VAC1, ECB2,... not classified & original description: pacid=50578170... 0.03 OrthoFinder output from all 47 species
Ceric.06G069000.1 Ceric.06G069000 not classified & original description: pacid=50620210... 0.03 OrthoFinder output from all 47 species
Ceric.12G028500.1 CRR22, Ceric.12G028500 not classified & original description: pacid=50602410... 0.03 OrthoFinder output from all 47 species
Ceric.21G030500.1 Ceric.21G030500 not classified & original description: pacid=50603713... 0.03 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.03 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.03 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08946 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008715001 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49930.1 LOC_Os03g49930 Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
LOC_Os06g49185.1 LOC_Os06g49185 Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
Len_g04746 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g33284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_16339g0010 CRR2 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
MA_8491g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g03529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g42976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Solyc02g011680.4.1 Solyc02g011680 Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
Solyc03g051780.3.1 Solyc03g051780 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc03g116840.3.1 Solyc03g116840 RNA editing factor (OTP81) 0.02 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.02 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Solyc12g042400.1.1 SLO1, Solyc12g042400 Pentatricopeptide repeat-containing protein At2g29760,... 0.02 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e005246_P001 Zm00001e005246 Pentatricopeptide repeat-containing protein At2g41080... 0.02 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!