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  5. AMTR_s00010p00214260

AMTR_s00010p00214260 (AGL66,...)


Aliases : AGL66, evm_27.TU.AmTr_v1.0_scaffold00010.217

Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00214260
Cluster HCCA: Cluster_17

GO:0009556
Target Alias Description ECC score Gene Family Method Actions
AT1G22130 AGL104 AGAMOUS-like 104 0.05 OrthoFinder output from all 47 species
AT1G69540 AGL94 AGAMOUS-like 94 0.02 OrthoFinder output from all 47 species
AT1G77980 AGL66 AGAMOUS-like 66 0.08 OrthoFinder output from all 47 species
AT2G03060 AGL30 AGAMOUS-like 30 0.06 OrthoFinder output from all 47 species
AT2G34440 AGL29 AGAMOUS-like 29 0.05 OrthoFinder output from all 47 species
AT3G04100 AGL57 AGAMOUS-like 57 0.03 OrthoFinder output from all 47 species
AT3G57390 AGL18 AGAMOUS-like 18 0.03 OrthoFinder output from all 47 species
AT3G66656 AGL91 AGAMOUS-like 910.03 OrthoFinder output from all 47 species
AT5G13790 AGL15 AGAMOUS-like 15 0.03 OrthoFinder output from all 47 species
Adi_g001519 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111938 AGL42 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05851 AGL30 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38807 AGL91 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04197 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36973 AGL3, SEP4 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g33008 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g70933 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13944.t1 AGL18, Aspi01Gene13944 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17819.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63673.t1 STK, AGL11,... MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27482 AGL104 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g37029 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G071800.1 AGL91, Ceric.11G071800 MADS/AGL-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ceric.39G001800.1 AGL104, Ceric.39G001800 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04433 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13563 AGL15 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07314 AGL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08748 AGL9, SEP3 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g32401 AGL10, CAL1, CAL not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001437001 AGL15 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01019883001 GL19, AGL19 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
GSVIVT01022182001 AGL104 RNA biosynthesis.transcriptional activation.MADS box... 0.08 OrthoFinder output from all 47 species
GSVIVT01025945001 STK, AGL11 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01037031001 AGL62 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Gb_03068 AGL16 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Gb_34101 SVP, AGL22 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g66030.1 PI, LOC_Os01g66030 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45770.1 AGL6, LOC_Os02g45770 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os05g34940.1 PI, LOC_Os05g34940 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os06g11970.1 AGL66, LOC_Os06g11970 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
LOC_Os08g38590.1 AGL104, LOC_Os08g38590 transcription factor (MADS/AGL) 0.07 OrthoFinder output from all 47 species
LOC_Os11g43740.1 AGL65, LOC_Os11g43740 transcription factor (MADS/AGL) 0.07 OrthoFinder output from all 47 species
LOC_Os12g10540.3 SHP2, AGL5,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Len_g20789 SHP2, AGL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24687 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31128 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10332736g0010 STK, AGL11 transcription factor (MADS/AGL) 0.01 OrthoFinder output from all 47 species
MA_16120g0010 AGL14 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_16629g0010 ANR1, AGL44 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Msp_g21617 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04651 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04325 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25142 AGL10, CAL1, CAL MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25344 AGL30 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c16_19170V3.1 AGL61, DIA, Pp3c16_19170 AGAMOUS-like 61 0.01 OrthoFinder output from all 47 species
Ppi_g08455 AGL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41259 AGL3, SEP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020974 GL19, AGL19 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g13249 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15459 No alias MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g35224 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36311 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g106710.1.1 AGL62, Solyc01g106710 component MED19 of head module of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Solyc02g091550.2.1 AGL21, Solyc02g091550 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Solyc05g051825.1.1 AGL104, Solyc05g051825 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc07g055920.4.1 SHP2, AGL5,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc10g080030.2.1 AGL18, Solyc10g080030 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Spa_g09517 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13870 AGL16 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g14680 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26308 AGL15 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014926_P001 AGL16, Zm00001e014926 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e021053_P001 AGL30, Zm00001e021053 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e030373_P001 AGL10, CAL1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e030839_P001 AGL66, Zm00001e030839 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e036127_P002 AGL66, Zm00001e036127 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 9 58
No external refs found!