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  5. AMTR_s00010p00210890

AMTR_s00010p00210890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.206

Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00210890

Target Alias Description ECC score Gene Family Method Actions
Aev_g25261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53126.t1 Aspi01Gene53126 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018723001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
GSVIVT01018725001 HIPP27 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
GSVIVT01019700001 No alias Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
Gb_05090 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_29098 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
LOC_Os03g06080.1 HIPP27, LOC_Os03g06080 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
LOC_Os03g26650.2 LOC_Os03g26650 Heavy metal-associated isoprenylated plant protein 23... 0.03 OrthoFinder output from all 47 species
LOC_Os08g31140.1 LOC_Os08g31140 Heavy metal-associated isoprenylated plant protein 23... 0.06 OrthoFinder output from all 47 species
Lfl_g17429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_13573g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_54284g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Mp2g01740.1 ATX1, ATATX1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g12450.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g105000.3.1 Solyc01g105000 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g025790.4.1 Solyc03g025790 Heavy metal-associated isoprenylated plant protein 31... 0.04 OrthoFinder output from all 47 species
Solyc07g055010.3.1 Solyc07g055010 Heavy metal-associated isoprenylated plant protein 28... 0.04 OrthoFinder output from all 47 species
Solyc11g073020.3.1 Solyc11g073020 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g02349 ATX1, ATATX1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000154_P001 Zm00001e000154 Heavy metal-associated isoprenylated plant protein 30... 0.03 OrthoFinder output from all 47 species
Zm00001e000435_P001 HIPP27, Zm00001e000435 Heavy metal-associated isoprenylated plant protein 27... 0.03 OrthoFinder output from all 47 species
Zm00001e006177_P001 NAKR1, Zm00001e006177 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e009740_P001 Zm00001e009740 Heavy metal-associated isoprenylated plant protein 23... 0.05 OrthoFinder output from all 47 species
Zm00001e029729_P001 Zm00001e029729 Heavy metal-associated isoprenylated plant protein 36... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 95 147
No external refs found!