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  5. AMTR_s00010p00200600

AMTR_s00010p00200600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.190

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00200600

Target Alias Description ECC score Gene Family Method Actions
Aop_g12604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006373001 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g09200.1 LOC_Os03g09200 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pp3c22_11760V3.1 Pp3c22_11760 No annotation 0.01 OrthoFinder output from all 47 species
Spa_g09824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 182 334
IPR010369 SOK 30 227
No external refs found!