LOC_Os09g27140.1

Description : component MED20 of head module of MEDIATOR transcription co-activator complex

Gene families : OG_01_0002602 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002602_tree ,
OG_02_0002159 (LandPlants) Phylogenetic Tree(s): OG_02_0002159_tree ,
OG_03_0001877 (SeedPlants) Phylogenetic Tree(s): OG_03_0001877_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os09g27140.1
Cluster	HCCA: Cluster_353

Target	Alias	Description	ECC score	Gene Family Method
AT2G28230	No alias	TATA-binding related factor (TRF) of subunit 20 of...	0.04	Archaeplastida
Cre11.g476900	No alias	RNA biosynthesis.RNA polymerase II-dependent...	0.02	Archaeplastida
Pp3c7_2780V3.1	No alias	TATA-binding related factor (TRF) of subunit 20 of...	0.04	Archaeplastida
AT2G28230	No alias	TATA-binding related factor (TRF) of subunit 20 of...	0.03	LandPlants
Pp3c7_2780V3.1	No alias	TATA-binding related factor (TRF) of subunit 20 of...	0.04	LandPlants
AT2G28230	No alias	TATA-binding related factor (TRF) of subunit 20 of...	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013921	Mediator_Med20	3	220

External Links

No external refs found!

LOC_Os09g27140.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation