AMTR_s00010p00181420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.153

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00181420

Target Alias Description ECC score Gene Family Method Actions
AT1G21150 No alias Mitochondrial transcription termination factor family protein 0.04 OrthoFinder output from all 47 species
AT1G62010 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
AT3G46950 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
AT5G07900 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
Aev_g02436 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g49279 No alias mTERF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g26943 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12846 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14738 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38044 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g43868 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.50 No alias RNA biosynthesis.organelle... 0.01 OrthoFinder output from all 47 species
Dcu_g11284 PTAC15 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
Gb_26175 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Gb_26176 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_493420g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_502709g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
Mp6g07740.1 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Nbi_g18127 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07862 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03790 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g072500.1.1 Solyc04g072500 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0097354 prenylation IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 249 358
IPR003690 MTERF 69 222
No external refs found!