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  5. AMTR_s00010p00116710

AMTR_s00010p00116710 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.69

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00116710

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00117910 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00157030 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00084p00087230 PTAC15,... RNA biosynthesis.organelle... 0.05 OrthoFinder output from all 47 species
AT1G61980 No alias Mitochondrial transcription termination factor family protein 0.04 OrthoFinder output from all 47 species
AT1G62010 No alias Mitochondrial transcription termination factor family protein 0.05 OrthoFinder output from all 47 species
AT1G62110 No alias Mitochondrial transcription termination factor family protein 0.02 OrthoFinder output from all 47 species
AT3G46950 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
AT5G23930 No alias Mitochondrial transcription termination factor family protein 0.03 OrthoFinder output from all 47 species
Ala_g05815 No alias mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10960 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48743 PTAC15 mTERF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_00751 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Gb_07257 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species
Gb_13847 PTAC15 TAC15 cofactor of plastid-encoded RNA polymerase.... 0.03 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.05 OrthoFinder output from all 47 species
LOC_Os05g33440.1 LOC_Os05g33440 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33460.2 LOC_Os05g33460 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12080.1 LOC_Os06g12080 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g24090.1 LOC_Os07g24090 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g09990.1 LOC_Os11g09990 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g14130.1 LOC_Os11g14130 transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_10083329g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_140519g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_3151g0010 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
MA_31885g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_502709g0010 No alias transcription factor (mTERF) 0.04 OrthoFinder output from all 47 species
Pir_g37676 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30682 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g011700.2.1 Solyc04g011700 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Solyc04g072530.2.1 Solyc04g072530 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 178 304
IPR003690 MTERF 82 175
No external refs found!