AMTR_s00010p00114980 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.68

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00010p00114980

Target	Alias	Description	ECC score	Gene Family Method
AT3G46950	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020965.50	No alias	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
Gb_07257	PTAC15	TAC15 cofactor of plastid-encoded RNA polymerase....	0.03	OrthoFinder output from all 47 species
Gb_15298	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Gb_24665	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Gb_31439	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_140519g0010	No alias	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
MA_3151g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Ore_g20233	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004835	tubulin-tyrosine ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	48	124
IPR003690	MTERF	109	301

External Links

No external refs found!