Aliases : emb1220, evm_27.TU.AmTr_v1.0_scaffold00009.430
Description : RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component
Gene families : OG0005384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005384_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00009p00268610 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g002410 | emb1220 | component *(PRPF31) of spliceosomal U4/U6 snRNP &... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001107.12 | emb1220 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.01 | OrthoFinder output from all 47 species | |
Solyc08g078430.4.1 | emb1220, Solyc08g078430 | protein factor PRPF31 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06148 | emb1220 | component *(PRPF31) of spliceosomal U4/U6 snRNP &... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
BP | GO:0006184 | obsolete GTP catabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0042592 | homeostatic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0045454 | cell redox homeostasis | IEP | HCCA |
BP | GO:0051258 | protein polymerization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
No external refs found! |