1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00009p00264940

AMTR_s00009p00264940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.378

Description : Choline transporter protein 1 OS=Arabidopsis thaliana


Gene families : OG0003269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003269_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00264940

Target Alias Description ECC score Gene Family Method Actions
Aev_g27338 No alias choline transporter *(CHER/CTL1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001542.16 No alias Choline transporter protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Gb_03567 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_03568 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_89558g0010 No alias Choline transporter protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g063230.3.1 Solyc07g063230 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e006509_P001 Zm00001e006509 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e024273_P001 Zm00001e024273 Choline transporter protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004399 histidinol dehydrogenase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008158 hedgehog receptor activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 328 674
No external refs found!