- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.372
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00009p00264430 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G28270 | ATRMA2, RMA2 | RING membrane-anchor 2 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g012747 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g00811 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07901 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16158 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g35414 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g68805 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0159.g053943 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-882 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G009900.1 | Ceric.10G009900 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G044800.1 | RMA3, ATRMA3,... | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.18G044900.1 | Ceric.18G044900 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G045100.1 | Ceric.18G045100 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G045400.1 | Ceric.18G045400 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.18G045500.1 | Ceric.18G045500 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.19G012000.1 | Ceric.19G012000 | not classified & original description: pacid=50576245... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g08588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20634 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g35812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07622 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g18993 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014361001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g42690.3 | LOC_Os02g42690 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g44820.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g23170 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13801 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22217 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17201 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g35625 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02425 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62388 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008785 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-708 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012732 | RMA3, ATRMA3 | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-450 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g45037 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109340.4.1 | Solyc01g109340 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g054080.3.1 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g010670.1.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03199 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05542 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g19950 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21470 | No alias | E3 ubiquiTin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g22866 | No alias | E3 ubiquiTin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003329_P001 | Zm00001e003329 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041298_P002 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0061134 | peptidase regulator activity | IEP | HCCA |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |