Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1, evm_27.TU.AmTr_v1.0_scaffold00009.357
Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor
Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g047581 | MYB54, ATMYB54 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g04741 | MYBR1, MYB44,... | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g12966 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g677382 | MYBR1, MYB44,... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g03575 | MYB73, ATMYB73 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009566001 | MYB70, AtMYB70 | RNA biosynthesis.transcriptional activation.MYB... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01019967001 | AtMYB117, LOF1, MYB117 | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
Len_g56915 | MYB88, AtMYB88 | MYB class-R2R3 transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g01931 | AtMYB109, MYB109 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g20759 | LOF2, MYB105, ATMYB105 | MYB class-R2R3 subgroup-21 transcription factor &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g29088 | MYB1, AtMYB1 | MYB class-R2R3 subgroup-22/23 transcription factor &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g064540.4.1 | BW52, ATMYB52,... | transcription factor (MYB) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000156 | phosphorelay response regulator activity | IEP | HCCA |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0060089 | molecular transducer activity | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001005 | SANT/Myb | 151 | 193 |
No external refs found! |