AMTR_s00009p00258320 (CAC3,...)

Aliases : CAC3, evm_27.TU.AmTr_v1.0_scaffold00009.300

Description : Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.polymeric acetyl-CoA carboxylase complex.carboxyltransferase alpha subunit

Gene families : OG0002202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002202_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00009p00258320

Target	Alias	Description	ECC score	Gene Family Method
AT2G38040	CAC3	acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit	0.06	OrthoFinder output from all 47 species
Adi_g023066	CAC3	carboxyltransferase subunit alpha of polymeric...	0.07	OrthoFinder output from all 47 species
Cba_g10340	CAC3	carboxyltransferase subunit alpha of polymeric...	0.03	OrthoFinder output from all 47 species
Cba_g24834	CAC3	carboxyltransferase subunit alpha of polymeric...	0.04	OrthoFinder output from all 47 species
Ceric.34G065800.1	CAC3, Ceric.34G065800	carboxyltransferase subunit alpha of polymeric...	0.06	OrthoFinder output from all 47 species
Cre12.g519100	CAC3	Lipid metabolism.fatty acid synthesis.acetyl-CoA...	0.04	OrthoFinder output from all 47 species
Gb_31070	CAC3	carboxyltransferase subunit alpha of polymeric...	0.04	OrthoFinder output from all 47 species
Len_g08453	CAC3	carboxyltransferase subunit alpha of polymeric...	0.03	OrthoFinder output from all 47 species
MA_39567g0020	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pir_g11278	CAC3	carboxyltransferase subunit alpha of polymeric...	0.06	OrthoFinder output from all 47 species
Pp3c19_7430V3.1	CAC3, Pp3c19_7430	acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit	0.01	OrthoFinder output from all 47 species
Pp3c22_4730V3.1	CAC3, Pp3c22_4730	acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit	0.03	OrthoFinder output from all 47 species
Solyc09g013080.3.1	CAC3, Solyc09g013080	carboxyltransferase subunit alpha of polymeric...	0.03	OrthoFinder output from all 47 species
Spa_g49335	CAC3	carboxyltransferase subunit alpha of polymeric...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003989	acetyl-CoA carboxylase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009317	acetyl-CoA carboxylase complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016421	CoA carboxylase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004655	porphobilinogen synthase activity	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0070402	NADPH binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001095	Acetyl_CoA_COase_a_su	101	244

External Links

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AMTR_s00009p00258320 (CAC3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation