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  5. AMTR_s00009p00257000

AMTR_s00009p00257000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.292

Description : COP1-interactive protein 1 OS=Arabidopsis thaliana


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00257000

Target Alias Description ECC score Gene Family Method Actions
Als_g33131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10431386g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g38210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025686 No alias not classified & original description: CDS=1028-3349 0.02 OrthoFinder output from all 47 species
Zm00001e037927_P004 Zm00001e037927 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 30 143
No external refs found!