LOC_Os09g26760.1


Description : DNA cross-link repair protein SNM1 OS=Arabidopsis thaliana (sp|q38961|snm1_arath : 270.0)


Gene families : OG_01_0002458 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002458_tree ,
OG_02_0007107 (LandPlants) Phylogenetic Tree(s): OG_02_0007107_tree ,
OG_03_0007468 (SeedPlants) Phylogenetic Tree(s): OG_03_0007468_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g26760.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cre09.g399907 No alias DNA ligase 6 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_02140 No alias SNM interstrand crosslink repair factor 0.12 Archaeplastida
MA_611292g0010 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.04 Archaeplastida
Mp1g24430.1 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c5_18670V3.1 No alias DNA repair metallo-beta-lactamase family protein 0.06 Archaeplastida
Solyc08g067250.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e009882_P001 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.12 Archaeplastida
MA_611292g0010 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.04 LandPlants
Mp1g24430.1 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.04 LandPlants
Solyc08g067250.4.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e009882_P001 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.1 LandPlants
MA_611292g0010 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.04 SeedPlants
Solyc08g067250.4.1 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e009882_P001 No alias DNA cross-link repair protein SNM1 OS=Arabidopsis... 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001660 SAM 490 549
IPR011084 DRMBL 847 951
No external refs found!