AMTR_s00009p00251790 (TUB8,...)


Aliases : TUB8, evm_27.TU.AmTr_v1.0_scaffold00009.262

Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.beta-Tubulin component


Gene families : OG0000009 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00251790
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
AT1G20010 TUB5 tubulin beta-5 chain 0.03 OrthoFinder output from all 39 species
AT5G44340 TUB4 tubulin beta chain 4 0.09 OrthoFinder output from all 39 species
AT5G62690 TUB2 tubulin beta chain 2 0.06 OrthoFinder output from all 39 species
AT5G62700 TUB3 tubulin beta chain 3 0.05 OrthoFinder output from all 39 species
Adi_g008453 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g028533 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Adi_g040881 TUB7 not classified & original description: none 0.06 OrthoFinder output from all 39 species
Adi_g075879 TUB2 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Adi_g076833 TUB1 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Adi_g082753 TUB7 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Adi_g085232 TUB7 not classified & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g094247 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 39 species
Adi_g105532 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Adi_g105533 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Adi_g114018 No alias not classified & original description: none 0.07 OrthoFinder output from all 39 species
Aev_g20343 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Als_g10858 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 39 species
Als_g18465 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Als_g19148 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Als_g54515 TUB2 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Als_g54742 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 39 species
Als_g54930 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Aob_g10793 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Aob_g26842 TUB9 not classified & original description: none 0.11 OrthoFinder output from all 39 species
Aob_g31908 No alias not classified & original description: none 0.12 OrthoFinder output from all 39 species
Aob_g31909 TUB7 not classified & original description: none 0.11 OrthoFinder output from all 39 species
Aop_g29463 TUB6 not classified & original description: none 0.08 OrthoFinder output from all 39 species
Aop_g33014 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Aop_g35765 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.08 OrthoFinder output from all 39 species
Aop_g42637 TUB8 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Aop_g43482 TUB2 not classified & original description: none 0.11 OrthoFinder output from all 39 species
Aop_g43724 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.1 OrthoFinder output from all 39 species
Aop_g43811 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.11 OrthoFinder output from all 39 species
Azfi_s0001.g000407 TUB1 not classified & original description: CDS=21-950 0.07 OrthoFinder output from all 39 species
Azfi_s0007.g010930 TUB6 not classified & original description: CDS=384-1319 0.1 OrthoFinder output from all 39 species
Cba_g42071 No alias not classified & original description: none 0.05 OrthoFinder output from all 39 species
Ceric.04G088300.1 TUB8, Ceric.04G088300 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Ceric.06G048500.1 TUB2, Ceric.06G048500 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Ceric.07G056800.1 TUB6, Ceric.07G056800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Ceric.19G036600.1 TUB6, Ceric.19G036600 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Ceric.27G053100.1 TUB6, Ceric.27G053100 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Ceric.31G054800.1 TUB2, Ceric.31G054800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 39 species
Cpa|evm.model.tig00001067.14 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Cpa|evm.model.tig00001067.6 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Cre12.g542250 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 OrthoFinder output from all 39 species
Cre12.g549550 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.1 OrthoFinder output from all 39 species
Dac_g30712 No alias not classified & original description: none 0.08 OrthoFinder output from all 39 species
Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Dcu_g08335 TUB7 not classified & original description: none 0.04 OrthoFinder output from all 39 species
Dde_g42464 TUB2 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Ehy_g30122 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
GSVIVT01019758001 TUB6 Tubulin beta-4 chain OS=Eleusine indica 0.1 OrthoFinder output from all 39 species
GSVIVT01021707001 TUB9 Tubulin beta chain (Fragment) OS=Glycine max 0.06 OrthoFinder output from all 39 species
GSVIVT01024825001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 39 species
Gb_25332 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.1 OrthoFinder output from all 39 species
LOC_Os01g18050.1 TUB6, LOC_Os01g18050 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 39 species
LOC_Os01g59150.1 TUB6, LOC_Os01g59150 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 39 species
LOC_Os02g07060.1 TUB8, LOC_Os02g07060 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 39 species
LOC_Os05g34170.2 TUB6, LOC_Os05g34170 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.1 OrthoFinder output from all 39 species
LOC_Os06g46000.1 TUB8, LOC_Os06g46000 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 39 species
Len_g08315 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Len_g18229 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Lfl_g05282 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Lfl_g05333 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
MA_4935021g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 189.0) 0.06 OrthoFinder output from all 39 species
MA_79708g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 39 species
Mp1g20730.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 39 species
Mp2g16780.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 39 species
Msp_g25659 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 39 species
Msp_g41363 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Msp_g45769 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Nbi_g06968 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Nbi_g23785 TUB8 not classified & original description: none 0.06 OrthoFinder output from all 39 species
Ore_g15539 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Ore_g26587 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 39 species
Ore_g32181 TUB8 not classified & original description: none 0.05 OrthoFinder output from all 39 species
Ore_g32182 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Ore_g32184 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Ore_g35396 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Ore_g37191 TUB8 not classified & original description: none 0.06 OrthoFinder output from all 39 species
Ore_g40498 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Ore_g44641 No alias not classified & original description: none 0.05 OrthoFinder output from all 39 species
Pir_g03054 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Pnu_g05150 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Pnu_g08717 No alias not classified & original description: none 0.06 OrthoFinder output from all 39 species
Pp3c21_17300V3.1 TUB6, Pp3c21_17300 tubulin beta chain 2 0.08 OrthoFinder output from all 39 species
Pp3c8_2420V3.1 TUB6, Pp3c8_2420 tubulin beta chain 2 0.03 OrthoFinder output from all 39 species
Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Ppi_g27529 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Sam_g09510 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Sam_g09511 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Sam_g16040 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Sam_g16934 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 39 species
Sam_g21913 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.1 OrthoFinder output from all 39 species
Sam_g31630 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Sam_g36813 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Sam_g44378 No alias not classified & original description: none 0.04 OrthoFinder output from all 39 species
Sam_g45541 No alias not classified & original description: none 0.07 OrthoFinder output from all 39 species
Smo164404 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Smo402668 TUB8 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder output from all 39 species
Smo408201 TUB8 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.08 OrthoFinder output from all 39 species
Spa_g09907 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Spa_g22305 No alias not classified & original description: none 0.05 OrthoFinder output from all 39 species
Spa_g34603 TUB1 not classified & original description: none 0.03 OrthoFinder output from all 39 species
Spa_g40800 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Spa_g50620 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Spa_g54478 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Spa_g54936 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Tin_g19305 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 39 species
Tin_g25400 TUB1 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 39 species
Tin_g35647 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Tin_g36502 No alias not classified & original description: none 0.08 OrthoFinder output from all 39 species
Tin_g39938 No alias not classified & original description: none 0.03 OrthoFinder output from all 39 species
Tin_g45513 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 39 species
Zm00001e011926_P001 TUB8, Zm00001e011926 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.11 OrthoFinder output from all 39 species
Zm00001e012336_P001 TUB8, Zm00001e012336 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 39 species
Zm00001e019525_P002 TUB6, Zm00001e019525 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.08 OrthoFinder output from all 39 species
Zm00001e025464_P001 TUB6, Zm00001e025464 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 39 species
Zm00001e028896_P004 TUB6, Zm00001e028896 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.1 OrthoFinder output from all 39 species
Zm00001e030351_P001 Zm00001e030351 no hits & (original description: none) 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006184 obsolete GTP catabolic process IEA Interproscan
BP GO:0051258 protein polymerization IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 222
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
No external refs found!