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  5. AMTR_s00009p00248470

AMTR_s00009p00248470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.246

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL36 component


Gene families : OG0000800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000800_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00009p00248470

Target Alias Description ECC score Gene Family Method Actions
Cre12.g484050 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g17175 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Gb_10248 No alias component RPL36 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g31817 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Pir_g05044 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_19960V3.1 Pp3c14_19960 Ribosomal protein L36e family protein 0.02 OrthoFinder output from all 47 species
Pp3c1_32310V3.1 Pp3c1_32310 Ribosomal protein L36e family protein 0.01 OrthoFinder output from all 47 species
Ppi_g25844 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g31192 No alias component *(eL36) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 6 102
No external refs found!