1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00009p00247110

AMTR_s00009p00247110 (SKIP4,...)


Aliases : SKIP4, evm_27.TU.AmTr_v1.0_scaffold00009.242

Description : F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00247110

Target Alias Description ECC score Gene Family Method Actions
Aev_g03275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04076 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g29757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g07160.1 LOC_Os03g07160 phenylpropanoid biosynthesis regulator (SAGL1) 0.03 OrthoFinder output from all 47 species
Msp_g47852 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Nbi_g06659 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g15800 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g01338 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 163 203
IPR006652 Kelch_1 116 159
No external refs found!