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  5. AMTR_s00009p00242790

AMTR_s00009p00242790 (MYC6.2, GL3,...)


Aliases : MYC6.2, GL3, evm_27.TU.AmTr_v1.0_scaffold00009.224

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00242790

Target Alias Description ECC score Gene Family Method Actions
AT4G00870 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G09820 BHLH42, TT8 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g15859 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014776 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2304 0.05 OrthoFinder output from all 47 species
Azfi_s0114.g046110 No alias bHLH-type transcription factor & original description: CDS=1-2184 0.05 OrthoFinder output from all 47 species
Lfl_g06164 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29473 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42150 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10858 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13609 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013863 No alias bHLH-type transcription factor & original description: CDS=1-1902 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018967 ATMYC2, MYC2,... bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Zm00001e033106_P004 BHLH42, TT8,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 16 199
IPR011598 bHLH_dom 482 521
No external refs found!