AMTR_s00009p00216000 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.152

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL30 component

Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00009p00216000
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene70271.t1	Aspi01Gene70271	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g01156	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c16_10400V3.1	Pp3c16_10400	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	0.01	OrthoFinder output from all 47 species
Pp3c4_15480V3.1	Pp3c4_15480	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	0.01	OrthoFinder output from all 47 species
Ppi_g45700	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g00684	No alias	component *(eL30) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004298	threonine-type endopeptidase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0070003	threonine-type peptidase activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45	13	105

External Links

No external refs found!