AMTR_s00009p00194700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.124

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00194700

Target Alias Description ECC score Gene Family Method Actions
AT1G10480 ZFP5 zinc finger protein 5 0.02 OrthoFinder output from all 47 species
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G67030 ZFP6 zinc finger protein 6 0.03 OrthoFinder output from all 47 species
Adi_g013397 ZFP4 C2H2 subclass ZFP transcription factor & original... 0.06 OrthoFinder output from all 47 species
Adi_g033743 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g055703 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g058601 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.01 OrthoFinder output from all 47 species
Adi_g060299 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g05936 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g09410 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g18015 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g25632 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g12668 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g28748 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.16G000500.1 RAB, RBE, Ceric.16G000500 C2H2 subclass ZFP transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.29G024000.1 Ceric.29G024000 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.36G065600.1 RAB, RBE, Ceric.36G065600 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g00797 No alias C2H2 subclass ZFP transcription factor & original... 0.07 OrthoFinder output from all 47 species
Dde_g47144 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g51875 KNU C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04711 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13927 GIS2 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Gb_12546 ZFP1, ATZFP1 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g03840.1 JAG, LOC_Os01g03840 Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os03g11680.1 ZFP8, LOC_Os03g11680 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g44190.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g38610.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g49598 No alias C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Lfl_g03854 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Mp3g23440.1 ZFP6 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g18741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14312 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g15065 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.06 OrthoFinder output from all 47 species
Pir_g21934 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.17 OrthoFinder output from all 47 species
Pir_g23317 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_6880V3.1 Pp3c5_6880 C2H2 and C2HC zinc fingers superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g05120 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc04g014540.3.1 ZFP4, Solyc04g014540 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc09g066250.1.1 Solyc09g066250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g089590.1.1 SUP, FLO10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc10g084910.3.1 TAC1, Solyc10g084910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g31910 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e013379_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e020926_P001 Zm00001e020926 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e025728_P002 JAG, Zm00001e025728 Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Zm00001e034883_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037946_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!