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  5. AMTR_s00009p00188280

AMTR_s00009p00188280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00009.119

No description available


Gene families : OG0001920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00009p00188280
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Ala_g08572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g24740.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g15197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0004733 pyridoxamine-phosphate oxidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007700 DUF668 392 483
IPR021864 DUF3475 1 48
No external refs found!