AMTR_s00009p00109990 (VAN, BLH9, RPL, PNY,...)

Aliases : VAN, BLH9, RPL, PNY, LSN, BLR, HB-6, evm_27.TU.AmTr_v1.0_scaffold00009.52

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor

Gene families : OG0000268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000268_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00009p00109990

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010423	BEL10, BLH10	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18681	BLH2, SAW1	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Gb_36166	EDA29, BLH1	transcription factor (BEL)	0.07	OrthoFinder output from all 47 species
LOC_Os03g47740.1	BLH7, LOC_Os03g47740	transcription factor (BEL)	0.04	OrthoFinder output from all 47 species
Pir_g26461	BLH7	BEL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019369	EDA29, BLH1	BEL-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Spa_g18122	EDA29, BLH1	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000495_P001	BLH7, Zm00001e000495	transcription factor (BEL)	0.03	OrthoFinder output from all 47 species
Zm00001e005151_P001	BLH7, Zm00001e005151	transcription factor (BEL)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004348	glucosylceramidase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
CC	GO:0005622	intracellular anatomical structure	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006563	POX_dom	363	524
IPR008422	Homeobox_KN_domain	601	640

External Links

No external refs found!