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  5. AMTR_s00008p00104700

AMTR_s00008p00104700 (SUVH5, SGD9,...)


Aliases : SUVH5, SGD9, evm_27.TU.AmTr_v1.0_scaffold00008.39

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00104700

Target Alias Description ECC score Gene Family Method Actions
AT5G13960 SDG33, SUVH4, KYP SU(VAR)3-9 homolog 4 0.04 OrthoFinder output from all 47 species
Adi_g009459 SDG33, SUVH4, KYP histone H3K9 methyltransferase *(KYP) & original... 0.02 OrthoFinder output from all 47 species
Adi_g082863 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aop_g10763 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene10835.t1 SUVH1, Aspi01Gene10835 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18047.t1 SDG33, SUVH4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22319.t2 SDG33, SUVH4,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene53627.t1 SDG23, SUVH6,... EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Ceric.36G048900.1 SDG33, SUVH4,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dac_g22044 SUVH3, SDG19 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Dde_g07221 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ehy_g07904 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ehy_g14200 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01013854001 SUVH5, SGD9 Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
GSVIVT01032986001 SDG33, SUVH4, KYP Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Gb_01720 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59620.1 SUVH1, LOC_Os01g59620 class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
LOC_Os04g45990.1 SUVH5, SGD9,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g45130.1 SET22, SDG22,... class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Len_g54963 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Lfl_g27877 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
MA_790260g0010 SUVH5, SGD9 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Ppi_g08636 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Tin_g09790 SDG23, SUVH6 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 536 668
IPR003105 SRA_YDG 230 394
IPR007728 Pre-SET_dom 422 517
No external refs found!