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  5. AMTR_s00008p00103090

AMTR_s00008p00103090 (SDG23, SUVH6,...)


Aliases : SDG23, SUVH6, evm_27.TU.AmTr_v1.0_scaffold00008.37

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00103090

Target Alias Description ECC score Gene Family Method Actions
Ehy_g14200 SUVH1 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
GSVIVT01027942001 ATSUVH2, SDG3, SUVH2 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
LOC_Os01g59620.1 SUVH1, LOC_Os01g59620 class V/Su(var) histone methyltransferase component of... 0.02 OrthoFinder output from all 47 species
Pir_g26465 ATSUVH2, SDG3, SUVH2 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
MF GO:0042393 histone binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003105 SRA_YDG 290 455
IPR001214 SET_dom 597 728
IPR007728 Pre-SET_dom 482 578
No external refs found!