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  5. AMTR_s00008p00058550

AMTR_s00008p00058550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.19

Description : Nutrient uptake.nitrogen assimilation.nitrate assimilation.nitrate reductase


Gene families : OG0001571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00058550

Target Alias Description ECC score Gene Family Method Actions
Ala_g08016 B29, ATNR2, NR,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09343 NR1, NIA1, GNR1 EC_1.7 oxidoreductase acting on other nitrogenous... 0.02 OrthoFinder output from all 47 species
Aspi01Gene66281.t1 NR1, NIA1, GNR1,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.04 OrthoFinder output from all 47 species
Aspi01Gene66285.t1 NR1, NIA1, GNR1,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.05 OrthoFinder output from all 47 species
Aspi01Gene66286.t1 NR1, NIA1, GNR1,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66294.t1 NR1, NIA1, GNR1,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.04 OrthoFinder output from all 47 species
Ceric.26G016000.1 NR1, NIA1, GNR1,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.05 OrthoFinder output from all 47 species
Dac_g03412 NR1, NIA1, GNR1 EC_1.7 oxidoreductase acting on other nitrogenous... 0.04 OrthoFinder output from all 47 species
Ehy_g13127 NR1, NIA1, GNR1 EC_1.7 oxidoreductase acting on other nitrogenous... 0.06 OrthoFinder output from all 47 species
Ehy_g15877 B29, ATNR2, NR,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.02 OrthoFinder output from all 47 species
GSVIVT01008935001 B29, ATNR2, NR,... Nutrient uptake.nitrogen assimilation.nitrate... 0.04 OrthoFinder output from all 47 species
LOC_Os02g53130.1 NR1, NIA1, GNR1,... nitrate reductase 0.04 OrthoFinder output from all 47 species
Pir_g20534 NR1, NIA1, GNR1 EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Ppi_g28950 B29, ATNR2, NR,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009708 B29, ATNR2, NR,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.04 OrthoFinder output from all 47 species
Tin_g45357 B29, ATNR2, NR,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023793_P001 NR1, NIA1, GNR1,... nitrate reductase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
MF GO:0030151 molybdenum ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001433 OxRdtase_FAD/NAD-bd 783 889
IPR008333 Cbr1-like_FAD-bd_dom 656 763
IPR001199 Cyt_B5-like_heme/steroid-bd 537 607
IPR005066 MoCF_OxRdtse_dimer 347 478
IPR000572 OxRdtase_Mopterin-bd_dom 139 321
No external refs found!