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  5. AMTR_s00007p00265810

AMTR_s00007p00265810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.363

No description available


Gene families : OG0001203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00265810
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Als_g18378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G007100.1 Ceric.07G007100 not classified & original description: pacid=50627315... 0.05 OrthoFinder output from all 47 species
Dcu_g00807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g11950.1 LOC_Os02g11950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g21640.1 LOC_Os02g21640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g48150.1 LOC_Os02g48150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g45283 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g00881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034316_P002 Zm00001e034316 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!