1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00007p00265100

AMTR_s00007p00265100 (KAS2, ATKAS2, FAB1,...)


Aliases : KAS2, ATKAS2, FAB1, evm_27.TU.AmTr_v1.0_scaffold00007.356

Description : Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II


Gene families : OG0000624 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00265100

Target Alias Description ECC score Gene Family Method Actions
Aob_g20600 KAS1, KASI ketoacyl-ACP synthase I & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65032.t1 KAS1, KASI,... ketoacyl-ACP synthase I & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08485 KAS2, ATKAS2, FAB1 ketoacyl-ACP synthase II & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019565001 KAS1, KASI Lipid metabolism.fatty acid synthesis.plastidial Type II... 0.03 OrthoFinder output from all 47 species
Gb_06836 KAS1, KASI ketoacyl-ACP synthase I 0.03 OrthoFinder output from all 47 species
Gb_06837 KAS1, KASI ketoacyl-ACP synthase I 0.03 OrthoFinder output from all 47 species
Gb_11724 KAS1, KASI ketoacyl-ACP synthase I 0.03 OrthoFinder output from all 47 species
Gb_11725 KAS1, KASI 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.03 OrthoFinder output from all 47 species
Gb_15076 KAS1, KASI ketoacyl-ACP synthase I 0.03 OrthoFinder output from all 47 species
MA_10428839g0010 KAS2, ATKAS2, FAB1 ketoacyl-ACP synthase II 0.02 OrthoFinder output from all 47 species
MA_326409g0010 KAS1, KASI 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.02 OrthoFinder output from all 47 species
MA_49129g0020 KAS1, KASI 3-oxoacyl-[acyl-carrier-protein] synthase I,... 0.03 OrthoFinder output from all 47 species
Msp_g18865 KAS2, ATKAS2, FAB1 ketoacyl-ACP synthase II & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g37561 KAS1, KASI ketoacyl-ACP synthase I & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03534 KAS1, KASI ketoacyl-ACP synthase I & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12514 KAS1, KASI ketoacyl-ACP synthase I & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g122120.4.1 KAS2, ATKAS2,... ketoacyl-ACP synthase II 0.04 OrthoFinder output from all 47 species
Spa_g18424 KAS2, ATKAS2, FAB1 ketoacyl-ACP synthase II & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004733 pyridoxamine-phosphate oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR014031 Ketoacyl_synth_C 379 493
IPR014030 Ketoacyl_synth_N 126 371
No external refs found!