1. Home
  2. Species
  3. Angiopteris evecta
  4. Sequence
  5. Aev_g05519

Aev_g05519


Description : component *(PRPF3) of U4/U6.U5 tri-snRNP complex & original description: none


Gene families : OG0005854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005854_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g05519
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00169230 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
AT1G28060 No alias Pre-mRNA-splicing factor 3 0.03 OrthoFinder output from all 47 species
Ala_g07036 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.05 OrthoFinder output from all 47 species
Als_g18057 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Cba_g29384 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.03 OrthoFinder output from all 47 species
Cre09.g416000 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.01 OrthoFinder output from all 47 species
Dac_g21181 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g10004 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01032624001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Gb_36855 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07500.1 LOC_Os09g07500 protein factor PRPF3 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
MA_10432248g0010 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species
Mp1g10190.1 No alias protein factor PRPF3 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species
Ore_g10445 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.03 OrthoFinder output from all 47 species
Solyc06g036580.4.1 Solyc06g036580 protein factor PRPF3 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species
Spa_g30204 No alias component *(PRPF3) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e014268_P001 Zm00001e014268 protein factor PRPF3 of U4/U6 small nuclear... 0.02 OrthoFinder output from all 47 species
Zm00001e024816_P001 Zm00001e024816 protein factor PRPF3 of U4/U6 small nuclear... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR010541 Prp3_C 924 1047
IPR013881 Pre-mRNA_splic_Prp3 672 899
No external refs found!