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  5. AMTR_s00007p00218580

AMTR_s00007p00218580 (ETG1,...)


Aliases : ETG1, evm_27.TU.AmTr_v1.0_scaffold00007.204

Description : Cell cycle.interphase.DNA replication.preinitiation.MCM replicative DNA helicase complex.ETG1 associated component


Gene families : OG0004067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00218580
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT2G40550 ETG1 E2F target gene 1 0.08 OrthoFinder output from all 47 species
Adi_g059629 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.03 OrthoFinder output from all 47 species
Als_g04397 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.09 OrthoFinder output from all 47 species
Aob_g17241 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.03 OrthoFinder output from all 47 species
Aop_g06249 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.05 OrthoFinder output from all 47 species
Ceric.02G050200.1 ETG1, Ceric.02G050200 associated component *(ETG1) of MCM replicative DNA... 0.23 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.19 ETG1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.01 OrthoFinder output from all 47 species
Dcu_g46385 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.12 OrthoFinder output from all 47 species
GSVIVT01032703001 ETG1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.2 OrthoFinder output from all 47 species
Gb_33880 ETG1 associated component ETG1 of MCM replicative DNA helicase complex 0.1 OrthoFinder output from all 47 species
LOC_Os01g07260.1 ETG1, LOC_Os01g07260 associated component ETG1 of MCM replicative DNA helicase complex 0.07 OrthoFinder output from all 47 species
Len_g09244 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.08 OrthoFinder output from all 47 species
MA_10432938g0020 ETG1 associated component ETG1 of MCM replicative DNA helicase complex 0.12 OrthoFinder output from all 47 species
Mp8g16870.1 ETG1 associated component ETG1 of MCM replicative DNA helicase complex 0.12 OrthoFinder output from all 47 species
Msp_g11337 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.09 OrthoFinder output from all 47 species
Nbi_g05370 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.07 OrthoFinder output from all 47 species
Ppi_g16670 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010224 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.07 OrthoFinder output from all 47 species
Smo85461 ETG1 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder output from all 47 species
Spa_g04248 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.06 OrthoFinder output from all 47 species
Tin_g29687 ETG1 associated component *(ETG1) of MCM replicative DNA... 0.09 OrthoFinder output from all 47 species
Zm00001e016805_P001 ETG1, Zm00001e016805 associated component ETG1 of MCM replicative DNA helicase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019140 MCM_complex-bd 45 154
No external refs found!