Aliases : RPL16A, evm_27.TU.AmTr_v1.0_scaffold00007.174
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL11 component
Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G42740 | RPL16A | ribosomal protein large subunit 16A | 0.04 | OrthoFinder output from all 47 species | |
AT3G58700 | No alias | Ribosomal L5P family protein | 0.06 | OrthoFinder output from all 47 species | |
AT4G18730 | RPL16B | ribosomal protein L16B | 0.12 | OrthoFinder output from all 47 species | |
AT5G45775 | No alias | Ribosomal L5P family protein | 0.1 | OrthoFinder output from all 47 species | |
Adi_g004325 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Adi_g080914 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Adi_g080915 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g17681 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g30852 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Als_g11502 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g39011 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g17101 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Aop_g21493 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g30844 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g70327 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Azfi_s0350.g066549 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.02G112300.1 | RPL16A, Ceric.02G112300 | component *(uL5) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020610.38 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
Cre01.g027000 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | OrthoFinder output from all 47 species | |
Dac_g00272 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g15705 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g32571 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08602 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 47 species | |
Dcu_g27669 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Dde_g25923 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01020743001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01021244001 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.13 | OrthoFinder output from all 47 species | |
Gb_08546 | RPL16A | component RPL11 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
Gb_22357 | RPL16A | component RPL11 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g10820.1 | RPL16A, LOC_Os01g10820 | component RPL11 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os02g14059.1 | RPL16A, LOC_Os02g14059 | component RPL11 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g11710.1 | RPL16A, LOC_Os05g11710 | component RPL11 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
LOC_Os06g35730.1 | RPL16A, LOC_Os06g35730 | component RPL11 of LSU proteome component | 0.13 | OrthoFinder output from all 47 species | |
Lfl_g31914 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
MA_57785g0010 | RPL16A | 60S ribosomal protein L11-1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_74060g0010 | RPL16A | component RPL11 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
MA_86694g0010 | RPL16A | component RPL11 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
Mp2g24740.1 | RPL16A | component RPL11 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
Mp6g18870.1 | RPL16A | component RPL11 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
Msp_g09123 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Msp_g34305 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g00824 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c2_33280V3.1 | RPL16A, Pp3c2_33280 | ribosomal protein L16B | 0.02 | OrthoFinder output from all 47 species | |
Pp3c5_3870V3.1 | RPL16A, Pp3c5_3870 | Ribosomal L5P family protein | 0.04 | OrthoFinder output from all 47 species | |
Pp3c7_20160V3.1 | RPL16A, Pp3c7_20160 | ribosomal protein large subunit 16A | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g63573 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0072.g016923 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g17383 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
Sam_g21398 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Smo444767 | RPL16A | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from all 47 species | |
Solyc02g086240.3.1 | RPL16A, Solyc02g086240 | component RPL11 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
Solyc07g055230.4.1 | RPL16A, Solyc07g055230 | component RPL11 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
Solyc10g007980.3.1 | RPL16A, Solyc10g007980 | component RPL11 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
Solyc12g010930.2.1 | RPL16A, Solyc12g010930 | component RPL11 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
Spa_g07232 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.08 | OrthoFinder output from all 47 species | |
Spa_g07233 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.11 | OrthoFinder output from all 47 species | |
Spa_g22809 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
Spa_g25528 | No alias | component *(uL5) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
Spa_g30816 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g54041 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02344 | RPL16A | component *(uL5) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e024913_P001 | RPL16A, Zm00001e024913 | component RPL11 of LSU proteome component | 0.12 | OrthoFinder output from all 47 species | |
Zm00001e026886_P003 | RPL16A, Zm00001e026886 | component RPL11 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
Zm00001e037255_P001 | RPL16A, Zm00001e037255 | component RPL11 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005622 | intracellular anatomical structure | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003779 | actin binding | IEP | HCCA |
CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006465 | signal peptide processing | IEP | HCCA |
BP | GO:0007264 | small GTPase mediated signal transduction | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
No external refs found! |