1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00007p00126220

AMTR_s00007p00126220 (ADF8,...)


Aliases : ADF8, evm_27.TU.AmTr_v1.0_scaffold00007.79

Description : Cytoskeleton.microfilament network.actin polymerisation.cofilin-like actin depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00126220
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G01750 ADF11 actin depolymerizing factor 11 0.04 OrthoFinder output from all 47 species
AT2G16700 ADF5, ATADF5 actin depolymerizing factor 5 0.02 OrthoFinder output from all 47 species
AT5G52360 ADF10 actin depolymerizing factor 10 0.03 OrthoFinder output from all 47 species
Aev_g46917 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00265 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45503 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02536 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026879001 ADF11 Cytoskeleton.microfilament network.actin... 0.07 OrthoFinder output from all 47 species
GSVIVT01028963001 ADF7 Cytoskeleton.microfilament network.actin... 0.06 OrthoFinder output from all 47 species
LOC_Os02g44470.1 ADF11, LOC_Os02g44470 actin-depolymerizing factor 0.08 OrthoFinder output from all 47 species
LOC_Os04g46910.1 ADF7, LOC_Os04g46910 actin-depolymerizing factor 0.06 OrthoFinder output from all 47 species
LOC_Os07g30090.2 ADF7, LOC_Os07g30090 actin-depolymerizing factor 0.05 OrthoFinder output from all 47 species
Nbi_g38081 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42221 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36499 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42530 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g45576 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g094400.3.1 ADF10, Solyc01g094400 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Solyc10g084660.2.1 ATADF4, ADF4,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Spa_g14128 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002133_P002 ADF6, ATADF6,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Zm00001e007293_P001 ADF11, Zm00001e007293 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Zm00001e023183_P001 ADF7, Zm00001e023183 actin-depolymerizing factor 0.05 OrthoFinder output from all 47 species
Zm00001e034985_P001 ADF11, Zm00001e034985 actin-depolymerizing factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 12 136
No external refs found!