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  5. AMTR_s00007p00101250

AMTR_s00007p00101250 (ATPMEPCRA, PMEPCRA,...)


Aliases : ATPMEPCRA, PMEPCRA, evm_27.TU.AmTr_v1.0_scaffold00007.60

Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00101250
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
AMTR_s00129p00033080 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00070300 PME1, ATPME1,... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00073090 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00074780 PME61,... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AT1G02810 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT1G11580 ATPMEPCRA, PMEPCRA methylesterase PCR A 0.02 OrthoFinder output from all 47 species
AT1G23200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT1G53830 ATPME2, PME2 pectin methylesterase 2 0.03 OrthoFinder output from all 47 species
AT2G26440 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 OrthoFinder output from all 47 species
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT2G47550 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT3G10710 RHS12 root hair specific 12 0.05 OrthoFinder output from all 47 species
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT3G59010 PME61 pectin methylesterase 61 0.03 OrthoFinder output from all 47 species
AT4G02320 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 OrthoFinder output from all 47 species
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.04 OrthoFinder output from all 47 species
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G04960 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 OrthoFinder output from all 47 species
AT5G04970 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G49180 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
AT5G51500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 OrthoFinder output from all 47 species
Adi_g006880 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g06111 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aev_g20237 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ala_g26378 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32800 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Als_g05037 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Als_g07171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10486 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Als_g15045 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Als_g52485 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19937 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g23889 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g29199 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g07772 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g11322 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aop_g35624 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05823.t1 Aspi01Gene05823 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07382.t1 Aspi01Gene07382 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07383.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07394.t1 Aspi01Gene07394 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07398.t1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene39882.t1 Aspi01Gene39882 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45157.t1 ATPME2, PME2,... EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0113.g045942 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0205.g057784 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Azfi_s1989.g108563 No alias pectin methylesterase & original description: CDS=1-588 0.03 OrthoFinder output from all 47 species
Azfi_s3257.g115118 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.19G055400.1 Ceric.19G055400 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016400.1 ATPMEPCRF,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016500.1 Ceric.30G016500 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016600.1 Ceric.30G016600 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G021900.1 Ceric.34G021900 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g13438 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g15947 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dac_g22798 PME44, ATPME44 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g38611 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g41291 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g48560 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ehy_g02809 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03889 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08496 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g09100 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09155 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16152 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17913 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26672 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27414 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27713 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01018620001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01027356001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01027652001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01031667001 PME61 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01037349001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01037352001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01038546001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_01424 ATPME3, PME3 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_06354 ATPME3, PME3 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Gb_10523 ATPME3, PME3 pectin methylesterase 0.08 OrthoFinder output from all 47 species
Gb_18512 ATPME3, PME3 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_21388 ATPMEPCRF, PMEPCRF pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_24564 ATPME3, PME3 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Gb_25439 ATPMEPCRF, PMEPCRF pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_28387 ATPME3, PME3 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Gb_35881 ATPMEPCRF, PMEPCRF pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_38211 ATPMEPCRA, PMEPCRA pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os01g13320.1 LOC_Os01g13320 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os01g15039.1 LOC_Os01g15039 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os02g54190.1 PME61, LOC_Os02g54190 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os07g47830.1 ATPME3, PME3,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os11g08750.1 LOC_Os11g08750 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os11g36240.1 LOC_Os11g36240 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Len_g45359 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
MA_10434002g0010 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_10434624g0010 ATPME2, PME2 Pectinesterase/pectinesterase inhibitor U1 OS=Solanum... 0.03 OrthoFinder output from all 47 species
MA_10434624g0020 ATPME2, PME2 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_10435891g0010 PME61 pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_130858g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_133919g0010 ATPMEPCRB pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_18093g0010 ATPMEPCRA, PMEPCRA Pectinesterase 2.1 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
MA_2017g0010 ATPMEPCRF, PMEPCRF pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_436039g0010 ATPME2, PME2 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_54974g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_84680g0010 ATPME2, PME2 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_86577g0010 ATPMEPCRB pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_8928694g0010 No alias Probable pectinesterase/pectinesterase inhibitor 32... 0.05 OrthoFinder output from all 47 species
MA_931259g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_96515g0010 ATPMEPCRB pectin methylesterase 0.02 OrthoFinder output from all 47 species
Ore_g15067 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g22612 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g32251 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g36059 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pir_g23999 ATPMEPCRA, PMEPCRA EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06076 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g29006 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pp3c2_35260V3.1 ATPME3, PME3, Pp3c2_35260 pectin methylesterase 3 0.01 OrthoFinder output from all 47 species
Ppi_g12664 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ppi_g31109 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g63416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000947 No alias not classified & original description: CDS=1-831 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021279 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Smo114014 ATPMEPCRF, PMEPCRF Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Smo154356 ATPMEPCRA, PMEPCRA Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Smo420760 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Solyc01g091050.4.1 Solyc01g091050 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc01g099950.1.1 Solyc01g099950 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc01g099960.4.1 Solyc01g099960 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc02g014300.2.1 Solyc02g014300 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc02g081990.3.1 Solyc02g081990 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Solyc03g078100.3.1 Solyc03g078100 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc03g083360.3.1 ATPMEPCRF,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc03g083840.3.1 Solyc03g083840 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc03g083870.4.1 Solyc03g083870 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc03g123620.4.1 PME1, ATPME1,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc05g054360.4.1 Solyc05g054360 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc06g009180.3.1 Solyc06g009180 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc06g034360.2.1 Solyc06g034360 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc07g017600.3.1 PME44, ATPME44,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g064190.3.1 ATPMEPCRA,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc09g075350.4.1 Solyc09g075350 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc11g005770.2.1 Solyc11g005770 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g01966 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Spa_g06048 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g03433 ATPME2, PME2 EC_3.1 hydrolase acTing on ester bond & original... 0.02 OrthoFinder output from all 47 species
Tin_g14828 No alias EC_3.1 hydrolase acTing on ester bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g28885 ATPME2, PME2 EC_3.1 hydrolase acTing on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e011069_P001 PME61, Zm00001e011069 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e017514_P001 ATPMEPCRB, Zm00001e017514 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Zm00001e017515_P001 ATPME2, PME2,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e022184_P001 PME44, ATPME44,... pectin methylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e026790_P001 ATPMEPCRB, Zm00001e026790 pectin methylesterase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
CC GO:0005618 cell wall IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 242 538
IPR006501 Pectinesterase_inhib_dom 57 192
No external refs found!