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  5. AMTR_s00006p00267180

AMTR_s00006p00267180 (BCS1,...)


Aliases : BCS1, evm_27.TU.AmTr_v1.0_scaffold00006.297

Description : AAA-ATPase At3g28540 OS=Arabidopsis thaliana


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00267180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00111690 evm_27.TU.AmTr_v1... AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT5G40010 AATP1 AAA-ATPase 1 0.03 OrthoFinder output from all 47 species
Aev_g05390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g61783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33812 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.19G071100.1 Ceric.19G071100 not classified & original description: pacid=50575396... 0.03 OrthoFinder output from all 47 species
Ceric.19G071900.1 Ceric.19G071900 not classified & original description: pacid=50575289... 0.03 OrthoFinder output from all 47 species
Dcu_g05632 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g11177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008088001 No alias AAA-ATPase At3g28540 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018890001 BCS1 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01023336001 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032552001 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_27802 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58800.1 AATP1, LOC_Os03g58800 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28137.1 AATP1, LOC_Os12g28137 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28177.1 AATP1, LOC_Os12g28177 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g44190.1 AATP1, LOC_Os12g44190 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10111030g0010 No alias AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435468g0010 No alias AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_230170g0010 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5260g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_56516g0010 No alias AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp7g18570.1 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g36273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09595 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017709 No alias not classified & original description: CDS=1-1293 0.04 OrthoFinder output from all 47 species
Smo422466 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo75451 No alias AAA-ATPase At3g28600 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc03g033790.4.1 BCS1, Solyc03g033790 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g033840.4.1 BCS1, Solyc03g033840 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g49606 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003358_P001 AATP1, Zm00001e003358 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013138_P001 Zm00001e013138 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 23 119
IPR003959 ATPase_AAA_core 197 334
No external refs found!