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  5. AMTR_s00006p00255930

AMTR_s00006p00255930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.189

Description : Solute transport.carrier-mediated transport.APC superfamily.AAAP family.AAAP-type transporter


Gene families : OG0000562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00255930
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00254710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AT2G40420 No alias Transmembrane amino acid transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G56200 No alias Transmembrane amino acid transporter family protein 0.02 OrthoFinder output from all 47 species
Adi_g006718 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06081 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08697 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g001001 No alias solute transporter *(AAAP) & original description: CDS=1-1422 0.02 OrthoFinder output from all 47 species
Azfi_s0109.g045340 No alias solute transporter *(AAAP) & original description: CDS=417-1772 0.03 OrthoFinder output from all 47 species
Ceric.26G045500.1 Ceric.26G045500 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.30G024800.1 Ceric.30G024800 solute transporter *(AAAP) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14784 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009289001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01032724001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_00075 No alias solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Gb_40430 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Msp_g05382 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c22_4010V3.1 Pp3c22_4010 Transmembrane amino acid transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g02055 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06306 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052300.4.1 Solyc05g052300 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Zm00001e023437_P001 Zm00001e023437 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Zm00001e037526_P002 Zm00001e037526 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 3 194
No external refs found!