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  5. AMTR_s00006p00245590

AMTR_s00006p00245590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.126

Description : Nitrile-specifier protein 5 OS=Arabidopsis thaliana


Gene families : OG0004618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00245590
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G54040 ESR, ESP, TASTY epithiospecifier protein 0.03 OrthoFinder output from all 47 species
AT2G33070 ATNSP2, NSP2 nitrile specifier protein 2 0.03 OrthoFinder output from all 47 species
AT3G16400 NSP1, ATMLP-470, ATNSP1 nitrile specifier protein 1 0.06 OrthoFinder output from all 47 species
AT3G16410 NSP4 nitrile specifier protein 4 0.04 OrthoFinder output from all 47 species
AT5G48180 NSP5 nitrile specifier protein 5 0.03 OrthoFinder output from all 47 species
Aspi01Gene47322.t1 Aspi01Gene47322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g685500 No alias Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Dcu_g06783 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os09g07460.1 LOC_Os09g07460 Nitrile-specifier protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g03691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo79877 No alias Nitrile-specifier protein 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 80 124
IPR006652 Kelch_1 28 71
No external refs found!