AMTR_s00006p00059970 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.17

Description : Cellular respiration.oxidative phosphorylation.ATP synthase complex.peripheral MF1 subcomplex.subunit beta

Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00006p00059970

Target	Alias	Description	ECC score	Gene Family Method
AT5G08690	No alias	ATP synthase alpha/beta family protein	0.03	OrthoFinder output from all 47 species
Ala_g02159	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Als_g61400	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01310	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0004.g008388	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Dac_g12991	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
LOC_Os01g49190.1	LOC_Os01g49190	subunit beta of ATP synthase peripheral MF1 subcomplex	0.04	OrthoFinder output from all 47 species
LOC_Os05g47980.1	LOC_Os05g47980	subunit beta of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Lfl_g03155	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
MA_202096g0020	No alias	ATP synthase subunit beta, mitochondrial OS=Zea mays...	0.03	OrthoFinder output from all 47 species
Mp2g15450.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Msp_g10080	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.05	OrthoFinder output from all 47 species
Msp_g34161	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g36168	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Nbi_g15676	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ore_g20278	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ore_g20279	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25290	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Pir_g32512	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Pnu_g13190	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Solyc04g007550.4.1	Solyc04g007550	subunit beta of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Solyc05g008460.4.1	Solyc05g008460	subunit beta of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Tin_g04477	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Zm00001e032346_P003	Zm00001e032346	subunit beta of ATP synthase peripheral MF1 subcomplex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004619	phosphoglycerate mutase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	91	157
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	213	435
IPR000793	ATP_synth_asu_C	449	552

External Links

No external refs found!

AMTR_s00006p00059970 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation