1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00005p00255230

AMTR_s00005p00255230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.172

Description : Cell wall.pectin.xylogalacturonan.synthesis.xylogalacturonan xylosyltransferase


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00255230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00132530 evm_27.TU.AmTr_v1... Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aspi01Gene19945.t1 Aspi01Gene19945 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g42533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45350.1 LOC_Os01g45350 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc08g066680.3.1 Solyc08g066680 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc08g078450.3.1 Solyc08g078450 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e013898_P002 Zm00001e013898 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e015098_P001 Zm00001e015098 xylogalacturonan xylosyltransferase 0.01 OrthoFinder output from all 47 species
Zm00001e036361_P001 Zm00001e036361 xylogalacturonan xylosyltransferase 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004263 Exostosin 54 335
No external refs found!