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  5. AMTR_s00005p00238850

AMTR_s00005p00238850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.123

No description available


Gene families : OG0002009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00238850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00192180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G44190 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
Aev_g09319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g29039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37708 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05970.1 LOC_Os11g05970 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Solyc05g055180.3.1 Solyc05g055180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024298_P001 Zm00001e024298 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 20 120
No external refs found!