1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00005p00229410

AMTR_s00005p00229410 (RHD4,...)


Aliases : RHD4, evm_27.TU.AmTr_v1.0_scaffold00005.108

Description : Phosphoinositide phosphatase SAC7 OS=Arabidopsis thaliana


Gene families : OG0002032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002032_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00229410
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g113220 SACIB, IBS2,... group-SAC-II phosphoinositide 3-/4-phosphatase &... 0.03 OrthoFinder output from all 47 species
Ala_g13920 SACIB, IBS2,... group-SAC-II phosphoinositide 3-/4-phosphatase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene12269.t2 SACIB, IBS2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G032600.1 SAC8, ATG5,... group-SAC-II phosphoinositide 3-/4-phosphatase &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001155.23 No alias Phosphoinositide phosphatase SAC8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g388750 RHD4 Phosphoinositide phosphatase SAC7 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os03g18080.1 SAC8, ATG5,... SAC-group-II inositol-polyphosphate 3-/4-phosphatase 0.03 OrthoFinder output from all 47 species
Tin_g09605 SACIB, IBS2,... group-SAC-II phosphoinositide 3-/4-phosphatase &... 0.02 OrthoFinder output from all 47 species
Zm00001e022711_P001 RHD4, Zm00001e022711 SAC-group-II inositol-polyphosphate 3-/4-phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042578 phosphoric ester hydrolase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002013 SAC_dom 136 428
No external refs found!