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  5. AMTR_s00004p00261980

AMTR_s00004p00261980 (FES1,...)


Aliases : FES1, evm_27.TU.AmTr_v1.0_scaffold00004.259

Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00261980

Target Alias Description ECC score Gene Family Method Actions
AT3G18640 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from all 47 species
AT3G26850 No alias histone-lysine N-methyltransferases 0.03 OrthoFinder output from all 47 species
Als_g21455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23169 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Dac_g20324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08063 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
LOC_Os05g41790.1 LOC_Os05g41790 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_8408g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14444 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Msp_g15688 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Pir_g18853 No alias component *(FES1) of FRI-C transcription effector... 0.02 OrthoFinder output from all 47 species
Pir_g50384 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Pir_g61674 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Solyc03g006350.3.1 FES1, Solyc03g006350 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g17866 No alias component *(FES1) of FRI-C transcription effector... 0.04 OrthoFinder output from all 47 species
Tin_g10851 No alias component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 332 350
No external refs found!