AMTR_s00004p00192450 (AR192,...)

Aliases : AR192, evm_27.TU.AmTr_v1.0_scaffold00004.206

Description : GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana

Gene families : OG0002139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002139_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00004p00192450

Target	Alias	Description	ECC score	Gene Family Method
Adi_g024298	AR192	nucleotide exchange factor *(MGE) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g024299	AR192	nucleotide exchange factor *(MGE) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g01158	AR192	nucleotide exchange factor *(MGE) & original description: none	0.07	OrthoFinder output from all 47 species
Aop_g05888	AR192	nucleotide exchange factor *(MGE) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.34G002300.1	AR192, Ceric.34G002300	nucleotide exchange factor *(MGE) & original...	0.04	OrthoFinder output from all 47 species
Ceric.39G001400.1	AR192, Ceric.39G001400	nucleotide exchange factor *(MGE) & original...	0.08	OrthoFinder output from all 47 species
Dde_g21255	AR192	nucleotide exchange factor *(MGE) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g08305	AR192	nucleotide exchange factor *(MGE) & original description: none	0.03	OrthoFinder output from all 47 species
Mp7g19490.1	AR192	nucleotide exchange factor (MGE)	0.09	OrthoFinder output from all 47 species
Sam_g12871	No alias	nucleotide exchange factor *(MGE) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g00932	AR192	nucleotide exchange factor *(MGE) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	chaperone binding	IEA	Interproscan
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000740	GrpE	107	272

External Links

No external refs found!