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  5. AMTR_s00004p00110530

AMTR_s00004p00110530 (ATUBC2, UBC2,...)


Aliases : ATUBC2, UBC2, evm_27.TU.AmTr_v1.0_scaffold00004.90

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein


Gene families : OG0001764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00110530

Target Alias Description ECC score Gene Family Method Actions
Adi_g067091 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g04277 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.03 OrthoFinder output from all 47 species
Als_g50236 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G043600.1 ATUBC1, UBC1,... E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011359001 ATUBC2, UBC2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Mp8g17960.1 ATUBC1, UBC1 ubiquitin-conjugating E2 protein 0.03 OrthoFinder output from all 47 species
Ppi_g06769 ATUBC1, UBC1 E2 ubiquitin-conjugating enzyme *(UBC1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!