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  5. AMTR_s00004p00098480

AMTR_s00004p00098480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.80

No description available


Gene families : OG0004116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00098480

Target Alias Description ECC score Gene Family Method Actions
Aop_g09408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G063600.1 Ceric.34G063600 not classified & original description: pacid=50623043... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020539.41 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g11516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029154001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g17870.1 LOC_Os02g17870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g22850.2 LOC_Os06g22850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g100500.3.1 Solyc01g100500 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e024108_P001 Zm00001e024108 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR009730 MFAP1_C 141 421
No external refs found!