AMTR_s00004p00062410 (XIF, ATMYO5, ATXIF,...)

Aliases : XIF, ATMYO5, ATXIF, evm_27.TU.AmTr_v1.0_scaffold00004.45

Description : Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin

Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00004p00062410

Target	Alias	Description	ECC score	Gene Family Method
AT5G20490	ATXIK, XI-17, XIK	Myosin family protein with Dil domain	0.02	OrthoFinder output from all 47 species
Dcu_g06522	ATVIIIA, VIIIA	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g21690	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein &...	0.04	OrthoFinder output from all 47 species
GSVIVT01028469001	XI-8, XI-B, XIB, ATXIB	Cytoskeleton.microfilament network.myosin...	0.03	OrthoFinder output from all 47 species
Len_g01925	ATXIK, XI-17, XIK	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species
Mp3g23480.1	ATVIIIA, VIIIA	class VIII myosin microfilament-based motor protein	0.02	OrthoFinder output from all 47 species
Mp8g04010.1	ATXIK, XI-17, XIK	C3H zinc finger transcription factor. class XI myosin...	0.04	OrthoFinder output from all 47 species
Ore_g08938	ATVIIIA, VIIIA	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g18055	No alias	class XI myosin microfilament-based motor protein &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016459	myosin complex	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004009	Myosin_N	66	101
IPR000048	IQ_motif_EF-hand-BS	886	906
IPR000048	IQ_motif_EF-hand-BS	813	832
IPR000048	IQ_motif_EF-hand-BS	839	857
IPR000048	IQ_motif_EF-hand-BS	791	809
IPR000048	IQ_motif_EF-hand-BS	913	929
IPR001609	Myosin_head_motor_dom	119	774

External Links

No external refs found!