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  5. AMTR_s00003p00267520

AMTR_s00003p00267520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.387

No description available


Gene families : OG0002286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00267520

Target Alias Description ECC score Gene Family Method Actions
AT1G11210 No alias Protein of unknown function (DUF761) 0.03 OrthoFinder output from all 47 species
AT1G61260 No alias Protein of unknown function (DUF761) 0.02 OrthoFinder output from all 47 species
AT4G04990 No alias Protein of unknown function (DUF761) 0.04 OrthoFinder output from all 47 species
AT5G54300 No alias Protein of unknown function (DUF761) 0.08 OrthoFinder output from all 47 species
Adi_g115491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70358.t1 Aspi01Gene70358 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020312 No alias not classified & original description: CDS=1-1332 0.05 OrthoFinder output from all 47 species
Ceric.19G056900.1 Ceric.19G056900 not classified & original description: pacid=50576000... 0.04 OrthoFinder output from all 47 species
Ceric.39G026200.1 Ceric.39G026200 not classified & original description: pacid=50582435... 0.03 OrthoFinder output from all 47 species
Dac_g11959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006712001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01029463001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_16002 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g37620.1 LOC_Os07g37620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g00832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436592g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g32130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07369 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g21409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g006620.3.1 Solyc03g006620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g15732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 341 376
IPR025520 DUF4408 110 143
No external refs found!